PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OB12G24740.1
Common NameLOC102707086
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 295aa    MW: 31308.4 Da    PI: 5.2571
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OB12G24740.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_149.11.2e-15121177460
                   XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 
                    kr++r+ +NRe+ArrsR+RK+a +  Le  v eL +eN  L+k+l  +++++++ +
  OB12G24740.1 121 AKRTKRMLSNRESARRSRKRKQAHLNDLESQVSELRSENACLQKRLADMTQKYKQST 177
                   79*****************************************77777776666554 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.2E-16118182IPR004827Basic-leucine zipper domain
PfamPF001706.6E-13120175IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.737120183IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.6E-12120175No hitNo description
SuperFamilySSF579591.05E-11122173No hitNo description
CDDcd147022.69E-18123173No hitNo description
PROSITE patternPS000360125140IPR004827Basic-leucine zipper domain
PfamPF124981.5E-12189233IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    Send to blast
MKGGAGDGAA EVNCAGGGGG GDPGAYAAVL KSKLDLYCAA VAKSMEAKLE ESSLGYLNSQ  60
ASDTSQLVSQ ASFNGYGSTI ATNSNAIHDN DDQGKPANSA TSKEHSDDDG DLEENTNPAN  120
AKRTKRMLSN RESARRSRKR KQAHLNDLES QVSELRSENA CLQKRLADMT QKYKQSTTET  180
SNLRADVNTM RRKVNIAEEA VRRVTGRSLL LFTTSETPAS STPFSSGLSD AASALVEDDW  240
ANSSLPDEAI PVSCPAMASM RCVASLENLQ KRIRADSEAA STLSVPEAAA SDKQY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1134140RRSRKRK
2134141RRSRKRKQ
3136141SRKRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCU4056940.0CU405694.1 Oryza rufipogon (W1943) cDNA clone: ORW1943C113M07, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006664716.10.0PREDICTED: light-inducible protein CPRF2-like
TrEMBLJ3NER60.0J3NER6_ORYBR; Uncharacterized protein
STRINGOB12G24740.10.0(Oryza brachyantha)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP75952943
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28770.25e-30bZIP family protein